Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
: 23-36|60-74|104-118|148-160|192-204|240-252|281-292|309-323|340-353|379-390|411-425|457-470
Tilt angles:
- Segment: 23-36 - Tilt: 36.0°
- Segment: 60-74 - Tilt: 37.6°
- Segment: 104-118 - Tilt: 30.9°
- Segment: 148-160 - Tilt: 36.6°
- Segment: 192-204 - Tilt: 23.1°
- Segment: 240-252 - Tilt: 11.0°
- Segment: 281-292 - Tilt: 22.8°
- Segment: 309-323 - Tilt: 28.4°
- Segment: 340-353 - Tilt: 18.1°
- Segment: 379-390 - Tilt: 1.7°
- Segment: 411-425 - Tilt: 26.0°
- Segment: 457-470 - Tilt: 21.2°
Structural assessment:
MAIDEN score = -49.3692
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]