Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
: 22-36|61-75|100-113|148-163|192-203|240-252|276-288|311-322|342-355|377-390|414-426|456-470
Tilt angles:
- Segment: 22-36 - Tilt: 44.7°
- Segment: 61-75 - Tilt: 38.1°
- Segment: 100-113 - Tilt: 36.7°
- Segment: 148-163 - Tilt: 43.8°
- Segment: 192-203 - Tilt: 24.6°
- Segment: 240-252 - Tilt: 6.6°
- Segment: 276-288 - Tilt: 16.7°
- Segment: 311-322 - Tilt: 8.9°
- Segment: 342-355 - Tilt: 18.3°
- Segment: 377-390 - Tilt: 9.5°
- Segment: 414-426 - Tilt: 20.0°
- Segment: 456-470 - Tilt: 37.4°
Structural assessment:
MAIDEN score = -34.8311
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]