Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.4 Å
Number of TM segments = 12
Sequence positions:
: 18-44|54-78|97-117|142-166|186-208|235-255|271-291|304-325|341-363|371-392|414-447|449-470
Tilt angles:
- Segment: 18-44 - Tilt: 33.7°
- Segment: 54-78 - Tilt: 40.9°
- Segment: 97-117 - Tilt: 34.5°
- Segment: 142-166 - Tilt: 37.8°
- Segment: 186-208 - Tilt: 32.2°
- Segment: 235-255 - Tilt: 18.4°
- Segment: 271-291 - Tilt: 8.3°
- Segment: 304-325 - Tilt: 28.9°
- Segment: 341-363 - Tilt: 28.9°
- Segment: 371-392 - Tilt: 30.7°
- Segment: 414-447 - Tilt: 12.6°
- Segment: 449-470 - Tilt: 28.0°
Structural assessment:
MAIDEN score = -12.5743
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]