Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 12
Sequence positions:
: 20-36|60-74|103-115|145-159|192-207|239-253|275-291|307-321|340-356|377-391|409-424|459-472
Tilt angles:
- Segment: 20-36 - Tilt: 26.4°
- Segment: 60-74 - Tilt: 30.5°
- Segment: 103-115 - Tilt: 7.3°
- Segment: 145-159 - Tilt: 29.9°
- Segment: 192-207 - Tilt: 38.8°
- Segment: 239-253 - Tilt: 31.0°
- Segment: 275-291 - Tilt: 34.9°
- Segment: 307-321 - Tilt: 20.3°
- Segment: 340-356 - Tilt: 40.5°
- Segment: 377-391 - Tilt: 9.6°
- Segment: 409-424 - Tilt: 36.0°
- Segment: 459-472 - Tilt: 8.5°
Structural assessment:
MAIDEN score = -62.5714
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]