Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
: 26-38|56-73|105-116|145-159|190-207|240-251|270-289|307-322|341-355|377-388|415-426|456-468
Tilt angles:
- Segment: 26-38 - Tilt: 24.6°
- Segment: 56-73 - Tilt: 52.0°
- Segment: 105-116 - Tilt: 14.9°
- Segment: 145-159 - Tilt: 40.7°
- Segment: 190-207 - Tilt: 58.5°
- Segment: 240-251 - Tilt: 20.1°
- Segment: 270-289 - Tilt: 55.4°
- Segment: 307-322 - Tilt: 43.1°
- Segment: 341-355 - Tilt: 18.0°
- Segment: 377-388 - Tilt: 21.2°
- Segment: 415-426 - Tilt: 14.9°
- Segment: 456-468 - Tilt: 14.6°
Structural assessment:
MAIDEN score = -13.8219
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]