Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 12
Sequence positions:
: 19-39|59-74|100-116|146-162|190-207|236-254|274-296|306-325|339-356|373-392|410-427|456-473
Tilt angles:
- Segment: 19-39 - Tilt: 37.1°
- Segment: 59-74 - Tilt: 14.8°
- Segment: 100-116 - Tilt: 18.6°
- Segment: 146-162 - Tilt: 29.6°
- Segment: 190-207 - Tilt: 14.5°
- Segment: 236-254 - Tilt: 31.6°
- Segment: 274-296 - Tilt: 37.0°
- Segment: 306-325 - Tilt: 30.6°
- Segment: 339-356 - Tilt: 13.2°
- Segment: 373-392 - Tilt: 22.2°
- Segment: 410-427 - Tilt: 7.6°
- Segment: 456-473 - Tilt: 32.8°
Structural assessment:
MAIDEN score = -93.4240
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]