Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
: 23-37|60-74|105-122|146-159|191-205|237-252|275-290|311-325|338-352|378-391|412-423|456-469
Tilt angles:
- Segment: 23-37 - Tilt: 37.6°
- Segment: 60-74 - Tilt: 42.7°
- Segment: 105-122 - Tilt: 42.8°
- Segment: 146-159 - Tilt: 45.9°
- Segment: 191-205 - Tilt: 35.8°
- Segment: 237-252 - Tilt: 38.8°
- Segment: 275-290 - Tilt: 47.5°
- Segment: 311-325 - Tilt: 44.6°
- Segment: 338-352 - Tilt: 29.3°
- Segment: 378-391 - Tilt: 22.6°
- Segment: 412-423 - Tilt: 4.4°
- Segment: 456-469 - Tilt: 25.3°
Structural assessment:
MAIDEN score = -37.3151
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]