Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.7 Å
Number of TM segments = 12
Sequence positions:
: 19-40|56-75|100-121|143-160|192-210|230-250|275-303|305-321|342-363|374-391|413-431|452-471
Tilt angles:
- Segment: 19-40 - Tilt: 32.1°
- Segment: 56-75 - Tilt: 16.5°
- Segment: 100-121 - Tilt: 19.0°
- Segment: 143-160 - Tilt: 14.5°
- Segment: 192-210 - Tilt: 12.8°
- Segment: 230-250 - Tilt: 37.3°
- Segment: 275-303 - Tilt: 20.0°
- Segment: 305-321 - Tilt: 17.0°
- Segment: 342-363 - Tilt: 22.6°
- Segment: 374-391 - Tilt: 34.2°
- Segment: 413-431 - Tilt: 21.2°
- Segment: 452-471 - Tilt: 15.5°
Structural assessment:
MAIDEN score = -66.7411
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]