Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 12
Sequence positions:
: 26-40|56-71|108-126|133-154|194-208|234-251|278-294|310-325|339-356|377-389|414-426|455-467
Tilt angles:
- Segment: 26-40 - Tilt: 24.4°
- Segment: 56-71 - Tilt: 33.6°
- Segment: 108-126 - Tilt: 30.9°
- Segment: 133-154 - Tilt: 37.9°
- Segment: 194-208 - Tilt: 33.5°
- Segment: 234-251 - Tilt: 52.8°
- Segment: 278-294 - Tilt: 44.8°
- Segment: 310-325 - Tilt: 41.9°
- Segment: 339-356 - Tilt: 42.1°
- Segment: 377-389 - Tilt: 11.1°
- Segment: 414-426 - Tilt: 10.0°
- Segment: 455-467 - Tilt: 11.9°
Structural assessment:
MAIDEN score = -43.9332
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]