Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.0 Å
Number of TM segments = 12
Sequence positions:
: 22-42|56-75|100-125|140-163|190-210|234-254|273-293|307-325|338-357|373-392|411-431|451-470
Tilt angles:
- Segment: 22-42 - Tilt: 31.4°
- Segment: 56-75 - Tilt: 26.7°
- Segment: 100-125 - Tilt: 16.9°
- Segment: 140-163 - Tilt: 26.6°
- Segment: 190-210 - Tilt: 32.5°
- Segment: 234-254 - Tilt: 28.4°
- Segment: 273-293 - Tilt: 35.1°
- Segment: 307-325 - Tilt: 20.1°
- Segment: 338-357 - Tilt: 16.9°
- Segment: 373-392 - Tilt: 4.2°
- Segment: 411-431 - Tilt: 12.2°
- Segment: 451-470 - Tilt: 20.5°
Structural assessment:
MAIDEN score = -45.9861
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]