Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.0 Å
Number of TM segments = 12
Sequence positions:
: 20-39|59-76|102-121|145-162|191-207|235-253|274-292|307-325|340-357|374-391|413-429|455-472
Tilt angles:
- Segment: 20-39 - Tilt: 27.3°
- Segment: 59-76 - Tilt: 6.2°
- Segment: 102-121 - Tilt: 31.0°
- Segment: 145-162 - Tilt: 21.5°
- Segment: 191-207 - Tilt: 25.2°
- Segment: 235-253 - Tilt: 27.7°
- Segment: 274-292 - Tilt: 34.4°
- Segment: 307-325 - Tilt: 26.8°
- Segment: 340-357 - Tilt: 16.9°
- Segment: 374-391 - Tilt: 9.4°
- Segment: 413-429 - Tilt: 9.6°
- Segment: 455-472 - Tilt: 19.7°
Structural assessment:
MAIDEN score = -75.5092
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]