Cytochrome c oxidase subunit 1
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P00396
Pfam Acc: PF00115
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
: 25-37|57-71|107-123|143-159|194-208|238-251|281-292|310-325|339-353|376-390|412-425|456-469
Tilt angles:
- Segment: 25-37 - Tilt: 14.1°
- Segment: 57-71 - Tilt: 29.3°
- Segment: 107-123 - Tilt: 32.8°
- Segment: 143-159 - Tilt: 46.1°
- Segment: 194-208 - Tilt: 36.0°
- Segment: 238-251 - Tilt: 37.1°
- Segment: 281-292 - Tilt: 26.8°
- Segment: 310-325 - Tilt: 41.9°
- Segment: 339-353 - Tilt: 27.1°
- Segment: 376-390 - Tilt: 24.0°
- Segment: 412-425 - Tilt: 34.3°
- Segment: 456-469 - Tilt: 14.0°
Structural assessment:
MAIDEN score = -34.6770
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]