Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 78-96|116-138|152-169|214-229|254-269|289-303
Tilt angles:
- Segment: 78-96 - Tilt: 61.5°
- Segment: 116-138 - Tilt: 64.0°
- Segment: 152-169 - Tilt: 49.6°
- Segment: 214-229 - Tilt: 41.9°
- Segment: 254-269 - Tilt: 30.6°
- Segment: 289-303 - Tilt: 40.5°
Structural assessment:
MAIDEN score = -21.3049
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]