Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.6 Å
Number of TM segments = 7
Sequence positions:
: 42-59|75-94|116-136|152-169|210-228|252-269|292-308
Tilt angles:
- Segment: 42-59 - Tilt: 35.7°
- Segment: 75-94 - Tilt: 39.0°
- Segment: 116-136 - Tilt: 45.1°
- Segment: 152-169 - Tilt: 48.8°
- Segment: 210-228 - Tilt: 40.2°
- Segment: 252-269 - Tilt: 23.3°
- Segment: 292-308 - Tilt: 16.2°
Structural assessment:
MAIDEN score = -21.8875
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]