Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.3 Å
Number of TM segments = 6
Sequence positions:
: 77-98|112-134|153-170|208-228|254-272|286-307
Tilt angles:
- Segment: 77-98 - Tilt: 42.0°
- Segment: 112-134 - Tilt: 48.2°
- Segment: 153-170 - Tilt: 19.1°
- Segment: 208-228 - Tilt: 44.4°
- Segment: 254-272 - Tilt: 33.7°
- Segment: 286-307 - Tilt: 39.7°
Structural assessment:
MAIDEN score = -51.7867
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]