Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.3 Å
Number of TM segments = 6
Sequence positions:
: 78-109|111-138|155-174|210-229|254-271|292-306
Tilt angles:
- Segment: 78-109 - Tilt: 55.0°
- Segment: 111-138 - Tilt: 62.8°
- Segment: 155-174 - Tilt: 50.8°
- Segment: 210-229 - Tilt: 49.5°
- Segment: 254-271 - Tilt: 49.9°
- Segment: 292-306 - Tilt: 36.9°
Structural assessment:
MAIDEN score = 176.6686
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]