Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.1 Å
Number of TM segments = 7
Sequence positions:
: 42-59|74-92|116-137|152-169|210-229|251-268|293-309
Tilt angles:
- Segment: 42-59 - Tilt: 33.5°
- Segment: 74-92 - Tilt: 29.6°
- Segment: 116-137 - Tilt: 45.2°
- Segment: 152-169 - Tilt: 22.9°
- Segment: 210-229 - Tilt: 27.5°
- Segment: 251-268 - Tilt: 25.4°
- Segment: 293-309 - Tilt: 16.4°
Structural assessment:
MAIDEN score = -46.2929
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]