Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 6
Sequence positions:
: 77-99|111-137|151-169|210-228|254-271|290-305
Tilt angles:
- Segment: 77-99 - Tilt: 54.3°
- Segment: 111-137 - Tilt: 56.4°
- Segment: 151-169 - Tilt: 41.1°
- Segment: 210-228 - Tilt: 42.4°
- Segment: 254-271 - Tilt: 35.9°
- Segment: 290-305 - Tilt: 23.2°
Structural assessment:
MAIDEN score = -30.1502
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]