Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 6
Sequence positions:
: 74-93|115-133|155-169|209-224|255-269|293-305
Tilt angles:
- Segment: 74-93 - Tilt: 42.8°
- Segment: 115-133 - Tilt: 43.0°
- Segment: 155-169 - Tilt: 29.1°
- Segment: 209-224 - Tilt: 30.5°
- Segment: 255-269 - Tilt: 29.0°
- Segment: 293-305 - Tilt: 15.6°
Structural assessment:
MAIDEN score = -13.7279
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]