Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.2 Å
Number of TM segments = 6
Sequence positions:
: 73-96|104-137|152-174|207-229|252-277|291-309
Tilt angles:
- Segment: 73-96 - Tilt: 40.9°
- Segment: 104-137 - Tilt: 51.3°
- Segment: 152-174 - Tilt: 37.5°
- Segment: 207-229 - Tilt: 36.4°
- Segment: 252-277 - Tilt: 42.4°
- Segment: 291-309 - Tilt: 10.9°
Structural assessment:
MAIDEN score = -22.6288
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]