Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 7
Sequence positions:
: 42-59|76-93|117-133|156-170|210-227|252-266|293-308
Tilt angles:
- Segment: 42-59 - Tilt: 37.9°
- Segment: 76-93 - Tilt: 34.3°
- Segment: 117-133 - Tilt: 39.3°
- Segment: 156-170 - Tilt: 21.9°
- Segment: 210-227 - Tilt: 48.7°
- Segment: 252-266 - Tilt: 32.3°
- Segment: 293-308 - Tilt: 28.3°
Structural assessment:
MAIDEN score = -39.4152
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]