Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.0 Å
Number of TM segments = 6
Sequence positions:
: 68-107|109-139|148-170|207-228|254-274|285-306
Tilt angles:
- Segment: 68-107 - Tilt: 39.3°
- Segment: 109-139 - Tilt: 50.6°
- Segment: 148-170 - Tilt: 33.5°
- Segment: 207-228 - Tilt: 29.1°
- Segment: 254-274 - Tilt: 21.6°
- Segment: 285-306 - Tilt: 33.3°
Structural assessment:
MAIDEN score = -34.4839
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]