Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 37.0 Å
Number of TM segments = 6
Sequence positions:
: 71-106|110-139|152-175|203-236|249-273|286-310
Tilt angles:
- Segment: 71-106 - Tilt: 42.3°
- Segment: 110-139 - Tilt: 40.8°
- Segment: 152-175 - Tilt: 26.6°
- Segment: 203-236 - Tilt: 49.7°
- Segment: 249-273 - Tilt: 27.0°
- Segment: 286-310 - Tilt: 27.5°
Structural assessment:
MAIDEN score = -54.0844
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]