Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.7 Å
Number of TM segments = 6
Sequence positions:
: 75-99|101-138|152-174|210-234|252-269|288-309
Tilt angles:
- Segment: 75-99 - Tilt: 56.6°
- Segment: 101-138 - Tilt: 61.0°
- Segment: 152-174 - Tilt: 53.3°
- Segment: 210-234 - Tilt: 50.8°
- Segment: 252-269 - Tilt: 34.1°
- Segment: 288-309 - Tilt: 39.1°
Structural assessment:
MAIDEN score = -51.8026
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]