Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 6
Sequence positions:
: 75-95|116-138|153-166|210-225|257-271|286-303
Tilt angles:
- Segment: 75-95 - Tilt: 56.0°
- Segment: 116-138 - Tilt: 58.4°
- Segment: 153-166 - Tilt: 26.1°
- Segment: 210-225 - Tilt: 28.5°
- Segment: 257-271 - Tilt: 28.7°
- Segment: 286-303 - Tilt: 41.7°
Structural assessment:
MAIDEN score = -44.1247
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]