Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.3 Å
Number of TM segments = 6
Sequence positions:
: 71-101|112-139|142-169|207-228|254-272|287-307
Tilt angles:
- Segment: 71-101 - Tilt: 53.1°
- Segment: 112-139 - Tilt: 51.5°
- Segment: 142-169 - Tilt: 44.6°
- Segment: 207-228 - Tilt: 32.3°
- Segment: 254-272 - Tilt: 19.4°
- Segment: 287-307 - Tilt: 28.8°
Structural assessment:
MAIDEN score = -46.2115
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]