Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.7 Å
Number of TM segments = 6
Sequence positions:
: 78-97|113-146|151-169|218-233|251-266|290-306
Tilt angles:
- Segment: 78-97 - Tilt: 60.7°
- Segment: 113-146 - Tilt: 57.4°
- Segment: 151-169 - Tilt: 56.5°
- Segment: 218-233 - Tilt: 46.4°
- Segment: 251-266 - Tilt: 36.1°
- Segment: 290-306 - Tilt: 37.7°
Structural assessment:
MAIDEN score = -33.2004
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]