Rhodopsin
Organism: Bos taurus
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: P02699
Pfam Acc: PF10413
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.0 Å
Number of TM segments = 6
Sequence positions:
: 74-97|113-139|149-169|210-226|257-272|288-303
Tilt angles:
- Segment: 74-97 - Tilt: 53.8°
- Segment: 113-139 - Tilt: 61.0°
- Segment: 149-169 - Tilt: 43.7°
- Segment: 210-226 - Tilt: 27.1°
- Segment: 257-272 - Tilt: 21.6°
- Segment: 288-303 - Tilt: 32.8°
Structural assessment:
MAIDEN score = -6.1555
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]