Envelope glycoprotein gp160 precursor
Organism: Human immunodeficiency virus type 1 group M subtype B
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: P12489
Pfam Acc: PF00516
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 4
Sequence positions:
: 124-132|211-213|317-325|339-342
Tilt angles:
- Segment: 124-132 - Tilt: 34.5°
- Segment: 211-213 - Tilt: 32.2°
- Segment: 317-325 - Tilt: 41.3°
- Segment: 339-342 - Tilt: 39.5°
Structural assessment:
MAIDEN score = 9.0257
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]