Envelope glycoprotein gp160 precursor
Organism: Human immunodeficiency virus type 1 group M subtype D
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: P18799
Pfam Acc: PF00516
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 7
Sequence positions:
: 206-217|286-292|327-335|357-373|380-389|400-408|434-449
Tilt angles:
- Segment: 206-217 - Tilt: 56.0°
- Segment: 286-292 - Tilt: 15.8°
- Segment: 327-335 - Tilt: 3.6°
- Segment: 357-373 - Tilt: 47.1°
- Segment: 380-389 - Tilt: 33.1°
- Segment: 400-408 - Tilt: 30.9°
- Segment: 434-449 - Tilt: 61.7°
Structural assessment:
MAIDEN score = 47.1850
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]