Envelope glycoprotein gp150
Organism: Feline immunodeficiency virus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: P19030
Pfam Acc: PF09590
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 6
Sequence positions:
: 227-244|310-318|390-398|432-445|497-505|534-546
Tilt angles:
- Segment: 227-244 - Tilt: 38.4°
- Segment: 310-318 - Tilt: 23.2°
- Segment: 390-398 - Tilt: 17.6°
- Segment: 432-445 - Tilt: 30.7°
- Segment: 497-505 - Tilt: 48.5°
- Segment: 534-546 - Tilt: 36.6°
Structural assessment:
MAIDEN score = 37.6425
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]