Envelope glycoprotein gp150
Organism: Feline immunodeficiency virus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: P19030
Pfam Acc: PF09590
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 6
Sequence positions:
: 254-269|295-310|345-357|360-375|478-497|512-536
Tilt angles:
- Segment: 254-269 - Tilt: 12.4°
- Segment: 295-310 - Tilt: 32.2°
- Segment: 345-357 - Tilt: 31.3°
- Segment: 360-375 - Tilt: 25.8°
- Segment: 478-497 - Tilt: 47.8°
- Segment: 512-536 - Tilt: 60.6°
Structural assessment:
MAIDEN score = 16.2177
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]