Envelope glycoprotein gp160 precursor
Organism: Human immunodeficiency virus type 1 group M subtype B
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: P20888
Pfam Acc: PF00516
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.0 Å
Number of TM segments = 2
Sequence positions:
: 198-206|212-234
Tilt angles:
- Segment: 198-206 - Tilt: 76.0°
- Segment: 212-234 - Tilt: 38.6°
Structural assessment:
MAIDEN score = -1.0809
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]