Envelope glycoprotein gp160 precursor
Organism: Human immunodeficiency virus type 1 group M subtype B
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: P20888
Pfam Acc: PF00516
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 7
Sequence positions:
: 216-228|296-302|334-342|363-370|387-396|407-414|441-456
Tilt angles:
- Segment: 216-228 - Tilt: 53.1°
- Segment: 296-302 - Tilt: 16.9°
- Segment: 334-342 - Tilt: 6.1°
- Segment: 363-370 - Tilt: 28.5°
- Segment: 387-396 - Tilt: 33.5°
- Segment: 407-414 - Tilt: 34.9°
- Segment: 441-456 - Tilt: 64.0°
Structural assessment:
MAIDEN score = 8.9203
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]