Home Search Browse Deposit Download Help Contact
Probable amino-acid metabolite efflux pump

Organism: Escherichia coli
Model: Theoretical
Representation: Atomistic
Type: α-helical

UniProtKB AC: P31125
Pfam Acc: PF00892


Membrane assignment:

Output PDB file Download

Hydrophobic thickness = 22.0 Å

Number of TM segments = 8

Sequence positions:
: 32-50|64-76|90-106|115-128|146-159|181-211|214-232|244-256

Tilt angles:
- Segment: 32-50 - Tilt: 45.6°
- Segment: 64-76 - Tilt: 11.3°
- Segment: 90-106 - Tilt: 37.6°
- Segment: 115-128 - Tilt: 30.8°
- Segment: 146-159 - Tilt: 29.0°
- Segment: 181-211 - Tilt: 42.5°
- Segment: 214-232 - Tilt: 53.0°
- Segment: 244-256 - Tilt: 18.9°


Structural assessment:

MAIDEN score = -28.9015
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.


Scores for all residue pairs Download




[creation date: Sep-08-2016]