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Envelope glycoprotein gp160 precursor

Organism: Human immunodeficiency virus type 1 group M subtype B
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical

UniProtKB AC: P31819
Pfam Acc: PF00516


Membrane assignment:

Output PDB file Download

Hydrophobic thickness = 26.0 Å

Number of TM segments = 4

Sequence positions:
: 124-137|206-210|310-320|335-337

Tilt angles:
- Segment: 124-137 - Tilt: 53.5°
- Segment: 206-210 - Tilt: 45.0°
- Segment: 310-320 - Tilt: 47.9°
- Segment: 335-337 - Tilt: 36.7°


Structural assessment:

MAIDEN score = 21.3182
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.


Scores for all residue pairs Download




[creation date: Sep-08-2016]