Envelope glycoprotein gp160 precursor
Organism: Human immunodeficiency virus type 1 group M subtype B
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: P31819
Pfam Acc: PF00516
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.0 Å
Number of TM segments = 4
Sequence positions:
: 124-137|206-210|310-320|335-337
Tilt angles:
- Segment: 124-137 - Tilt: 53.5°
- Segment: 206-210 - Tilt: 45.0°
- Segment: 310-320 - Tilt: 47.9°
- Segment: 335-337 - Tilt: 36.7°
Structural assessment:
MAIDEN score = 21.3182
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]