UPF0721 transmembrane protein YrkJ
Organism: Bacillus subtilis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: P54437
Pfam Acc: PF01925
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 3
Sequence positions:
: 85-103|106-127|149-172
Tilt angles:
- Segment: 85-103 - Tilt: 36.7°
- Segment: 106-127 - Tilt: 34.4°
- Segment: 149-172 - Tilt: 43.4°
Structural assessment:
MAIDEN score = -19.2637
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]