Transmembrane protein
Organism: Oryza sativa
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: P93435
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 6
Sequence positions:
: 55-71|91-108|134-156|176-198|207-229|257-278
Tilt angles:
- Segment: 55-71 - Tilt: 23.0°
- Segment: 91-108 - Tilt: 20.1°
- Segment: 134-156 - Tilt: 41.2°
- Segment: 176-198 - Tilt: 30.8°
- Segment: 207-229 - Tilt: 25.7°
- Segment: 257-278 - Tilt: 42.1°
Structural assessment:
MAIDEN score = -42.5710
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]