Transmembrane protein
Organism: Oryza sativa
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: P93435
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 6
Sequence positions:
: 54-73|92-126|134-153|177-199|207-228|252-282
Tilt angles:
- Segment: 54-73 - Tilt: 11.7°
- Segment: 92-126 - Tilt: 30.6°
- Segment: 134-153 - Tilt: 31.1°
- Segment: 177-199 - Tilt: 39.4°
- Segment: 207-228 - Tilt: 33.0°
- Segment: 252-282 - Tilt: 50.3°
Structural assessment:
MAIDEN score = -44.7244
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]