UPF0699 transmembrane protein YdbT
Organism: Bacillus subtilis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: P96616
Pfam Acc: PF03703
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 8
Sequence positions:
: 78-87|110-115|125-136|178-191|199-212|274-286|325-332|336-344
Tilt angles:
- Segment: 78-87 - Tilt: 40.4°
- Segment: 110-115 - Tilt: 18.5°
- Segment: 125-136 - Tilt: 29.7°
- Segment: 178-191 - Tilt: 64.3°
- Segment: 199-212 - Tilt: 33.0°
- Segment: 274-286 - Tilt: 28.2°
- Segment: 325-332 - Tilt: 19.6°
- Segment: 336-344 - Tilt: 5.2°
Structural assessment:
MAIDEN score = 64.2285
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]