Transmembrane transporter, major facilitator family protein
Organism: Pelagibaca bermudensis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q0FRR2
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 8
Sequence positions:
: 48-69|76-93|99-125|135-155|167-183|210-233|323-342|348-370
Tilt angles:
- Segment: 48-69 - Tilt: 23.1°
- Segment: 76-93 - Tilt: 17.0°
- Segment: 99-125 - Tilt: 39.0°
- Segment: 135-155 - Tilt: 14.8°
- Segment: 167-183 - Tilt: 14.1°
- Segment: 210-233 - Tilt: 31.1°
- Segment: 323-342 - Tilt: 29.2°
- Segment: 348-370 - Tilt: 18.6°
Structural assessment:
MAIDEN score = -6.0875
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]