Novel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q0V9G4
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.2 Å
Number of TM segments = 5
Sequence positions:
: 20-41|50-64|87-105|124-140|179-196
Tilt angles:
- Segment: 20-41 - Tilt: 44.9°
- Segment: 50-64 - Tilt: 25.8°
- Segment: 87-105 - Tilt: 29.1°
- Segment: 124-140 - Tilt: 14.2°
- Segment: 179-196 - Tilt: 20.1°
Structural assessment:
MAIDEN score = -29.3310
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]