Novel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q0V9G4
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.0 Å
Number of TM segments = 6
Sequence positions:
: 19-35|56-72|85-107|137-154|182-200|221-238
Tilt angles:
- Segment: 19-35 - Tilt: 20.9°
- Segment: 56-72 - Tilt: 28.2°
- Segment: 85-107 - Tilt: 51.3°
- Segment: 137-154 - Tilt: 18.4°
- Segment: 182-200 - Tilt: 39.9°
- Segment: 221-238 - Tilt: 35.7°
Structural assessment:
MAIDEN score = -48.7512
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]