Putative uncharacterized protein At2g40420
Organism: Arabidopsis thaliana
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q0WQJ3
Pfam Acc: PF01490
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 11
Sequence positions:
: 32-46|57-73|96-119|157-170|180-202|229-242|264-283|309-340|353-365|384-398|408-422
Tilt angles:
- Segment: 32-46 - Tilt: 26.7°
- Segment: 57-73 - Tilt: 42.8°
- Segment: 96-119 - Tilt: 62.8°
- Segment: 157-170 - Tilt: 4.0°
- Segment: 180-202 - Tilt: 65.9°
- Segment: 229-242 - Tilt: 41.2°
- Segment: 264-283 - Tilt: 47.0°
- Segment: 309-340 - Tilt: 72.2°
- Segment: 353-365 - Tilt: 32.5°
- Segment: 384-398 - Tilt: 41.6°
- Segment: 408-422 - Tilt: 25.7°
Structural assessment:
MAIDEN score = -65.8617
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]