Transmembrane transporter, major facilitator family, putative
Organism: Roseobacter denitrificans
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q16D94
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 11
Sequence positions:
: 68-86|88-100|121-132|156-169|188-202|236-249|280-295|315-326|334-350|374-388|399-412
Tilt angles:
- Segment: 68-86 - Tilt: 45.1°
- Segment: 88-100 - Tilt: 26.2°
- Segment: 121-132 - Tilt: 27.6°
- Segment: 156-169 - Tilt: 12.2°
- Segment: 188-202 - Tilt: 29.8°
- Segment: 236-249 - Tilt: 30.0°
- Segment: 280-295 - Tilt: 31.8°
- Segment: 315-326 - Tilt: 2.1°
- Segment: 334-350 - Tilt: 45.4°
- Segment: 374-388 - Tilt: 27.5°
- Segment: 399-412 - Tilt: 15.0°
Structural assessment:
MAIDEN score = -1.7333
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]