Transmembrane transporter, major facilitator family, putative
Organism: Roseobacter denitrificans
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q16D94
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.7 Å
Number of TM segments = 12
Sequence positions:
: 30-45|68-86|89-107|122-138|155-171|187-202|230-249|282-299|310-326|334-354|371-387|400-417
Tilt angles:
- Segment: 30-45 - Tilt: 24.6°
- Segment: 68-86 - Tilt: 30.7°
- Segment: 89-107 - Tilt: 21.5°
- Segment: 122-138 - Tilt: 15.0°
- Segment: 155-171 - Tilt: 17.6°
- Segment: 187-202 - Tilt: 14.3°
- Segment: 230-249 - Tilt: 30.0°
- Segment: 282-299 - Tilt: 21.1°
- Segment: 310-326 - Tilt: 10.6°
- Segment: 334-354 - Tilt: 37.7°
- Segment: 371-387 - Tilt: 19.6°
- Segment: 400-417 - Tilt: 13.6°
Structural assessment:
MAIDEN score = -14.1767
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]