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Cytochrome c biogenesis protein, transmembrane region

Organism: Cupriavidus metallidurans
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical

UniProtKB AC: Q1LP70
Pfam Acc: PF00578


Membrane assignment:

Output PDB file Download

Hydrophobic thickness = 22.0 Å

Number of TM segments = 5

Sequence positions:
: 303-313|319-348|352-382|384-391|394-403

Tilt angles:
- Segment: 303-313 - Tilt: 47.1°
- Segment: 319-348 - Tilt: 56.3°
- Segment: 352-382 - Tilt: 50.1°
- Segment: 384-391 - Tilt: 39.3°
- Segment: 394-403 - Tilt: 30.0°


Structural assessment:

MAIDEN score = 43.1204
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.


Scores for all residue pairs Download




[creation date: Sep-08-2016]