OmpA-like transmembrane region
Organism: Nitrobacter hamburgensis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q1QRH0
Pfam Acc: PF13505
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 3
Sequence positions:
: 92-101|196-207|224-231
Tilt angles:
- Segment: 92-101 - Tilt: 46.3°
- Segment: 196-207 - Tilt: 57.6°
- Segment: 224-231 - Tilt: 43.1°
Structural assessment:
MAIDEN score = 1.2332
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]