OmpA-like transmembrane region
Organism: Nitrobacter hamburgensis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q1QRH0
Pfam Acc: PF13505
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 105-120|125-141|151-158|182-188|198-204|217-222
Tilt angles:
- Segment: 105-120 - Tilt: 58.0°
- Segment: 125-141 - Tilt: 61.5°
- Segment: 151-158 - Tilt: 51.0°
- Segment: 182-188 - Tilt: 31.3°
- Segment: 198-204 - Tilt: 30.1°
- Segment: 217-222 - Tilt: 19.7°
Structural assessment:
MAIDEN score = 12.3296
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]