Putative cation efflux system transmembrane protein
Organism: Photobacterium profundum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q1Z5U1
Pfam Acc: PF00873
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.0 Å
Number of TM segments = 8
Sequence positions:
: 12-28|399-412|439-455|475-495|531-543|925-941|975-989|1011-1033
Tilt angles:
- Segment: 12-28 - Tilt: 8.3°
- Segment: 399-412 - Tilt: 5.3°
- Segment: 439-455 - Tilt: 20.5°
- Segment: 475-495 - Tilt: 31.6°
- Segment: 531-543 - Tilt: 28.5°
- Segment: 925-941 - Tilt: 17.3°
- Segment: 975-989 - Tilt: 25.4°
- Segment: 1011-1033 - Tilt: 40.8°
Structural assessment:
MAIDEN score = -44.1257
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]